BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A12SP1|AL428156
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1935 0.0
>3x_Contig1727
Length = 17872
Score = 1935 bits (974), Expect = 0.0
Identities = 977/980 (99%)
Strand = Plus / Minus
Query: 1 gatccaagtaccgatagccaaaattatacccaagatgacggacataccccatagtcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17566 gatccaagtaccgatagccaaaattatacccaagatgacggacataccccatagtcttct 17507
Query: 61 caagttccacttgacaggctttggagagtatggagcattatcgtaagcvatagccaaggt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 17506 caagttccacttgacaggctttggagagtatggagcattatcgtaagcaatagccaaggt 17447
Query: 121 agcaacatcagcgaaaatagcaatgaagacaaccaagtcaatgttcaaagatctgttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17446 agcaacatcagcgaaaatagcaatgaagacaaccaagtcaatgttcaaagatctgttcaa 17387
Query: 181 gatagcaatccatagacccaagaagatttccaaatgtagggacaaagcgatacggtaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17386 gatagcaatccatagacccaagaagatttccaaatgtagggacaaagcgatacggtaaac 17327
Query: 241 gacgtaagagtacattctgtggaaaatttgtctagaggtcttcaaagcgtcaataatagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17326 gacgtaagagtacattctgtggaaaatttgtctagaggtcttcaaagcgtcaataatagc 17267
Query: 301 ggacaaacctggggccaagaaaacaatatcagcagcggatctagcggcatcggtagcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17266 ggacaaacctggggccaagaaaacaatatcagcagcggatctagcggcatcggtagcacc 17207
Query: 361 ttcgacagcaataccggtatcagccttcttcaaagatggggcatcgttaacaccgtcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17206 ttcgacagcaataccggtatcagccttcttcaaagatggggcatcgttaacaccgtcacc 17147
Query: 421 agtcatagcaaccaagtaacctctttgttgcaagatttcaacgacgttgtacttgtgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17146 agtcatagcaaccaagtaacctctttgttgcaagatttcaacgacgttgtacttgtgttg 17087
Query: 481 tgggaaaacttcagcgaaaccatcagcattttcaacgaaatcggccaattcggaacctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17086 tgggaaaacttcagcgaaaccatcagcattttcaacgaaatcggccaattcggaacctgg 17027
Query: 541 catgtcaccaccaccacctagacctaatctttcagcgttgtaaatgttagtacccaaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17026 catgtcaccaccaccacctagacctaatctttcagcgttgtaaatgttagtacccaaacc 16967
Query: 601 caattgtctacaagtttccttagcaataccgacagcgtcaccagttaacatcttaactct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16966 caattgtctacaagtttccttagcaataccgacagcgtcaccagttaacatcttaactct 16907
Query: 661 caaacccaagtgtctagcttcgttgacagtwtgagcagtgtcatctcttggaggatccat 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16906 caaacccaagtgtctagcttcgttgacagtttgagcagtgtcatctcttggaggatccat 16847
Query: 721 acatggcataacacccaaaatttcccagtgaccttcacctctctttctggcaacacccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16846 acatggcataacacccaaaatttcccagtgaccttcacctctctttctggcaacacccaa 16787
Query: 781 ggctctgaaacctctggaagccaattcagcaaccttgttttcgtagttttcacggacatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16786 ggctctgaaacctctggaagccaattcagcaaccttgttttcgtagttttcacggacatc 16727
Query: 841 ttctggaattggatgttcttcttcaacagtcttcaagacgaacaatggagcacccttaac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16726 ttctggaattggatgttcttcttcaacagtcttcaagacgaacaatggagcacccttaac 16667
Query: 901 acaaatgattctttcaccttctggagattcgacaatagcggtaaccttcttggaaacagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16666 acaaatgattctttcaccttctggagattcgacaatagcggtaaccttcttggaaacagg 16607
Query: 961 gtcgaatgggtggaatycca 980
|||||||||||||||| |||
Sbjct: 16606 gtcgaatgggtggaattcca 16587
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6737
Number of Sequences: 1807
Number of extensions: 6737
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)